Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857946.1_cds_XP_016513620.1_26143
CDS Infomation

[gene=LOC107830538] [db_xref=GeneID:107830538] [protein=F-box protein At5g06550-like] [protein_id=XP_016513620.1] [location=complement(join(50015..50255,51451..52745))] [gbkey=CDS]
Sequence

ATGCTGGGTTCCAAGACTTTGATATTCAAGAAGCAAAAACGAAAGAGGAAAAATGGCAAG
AGCAAAAAATCAAAGAAAATTTATGTTTCCAAAAAAGAAGAAAAGATTACCAAATCACAC
CAAATAACACCAAAACAAGAAGTTGAAGAAGAAGATGATGAGGGTTTCAGCTTGAAAGCC
TCAGCACAATCAGATTCCTATGGAGTTCAGCCGCTTGGGAATCTTTATTTCAACCCATCA
TATCATAATTCAAGAAACACTGGCCTAGGTAATCTCCAGACTTTAACTGATGAGCTTGTT
CTTGATATTTTAGGCCTTTTAGAAGGTACCCATTTAGGTATTTTGTCAAATGTAAGCAAA
GGTTTCTATATTTTTTGTAACCATGAACCCCTTTGGAGGAATCTTGTATTGGAAACTTGT
AAAGGTGGGTTCTTTTTTAAGGGTTCTTGGAAGTCTACTTTTGTTAGTGCATATAAGCAG
CCTTCATTTCCAGTTTTGAGTTCTGGTTTGAAAGTTAGAGACTTTTATTCTGATTACTTG
TTTCAGAGTTGGTTATGTGCTAATCTTGAAATGAAACCTGAATGGTTAGAAAAGGATAAT
ATTGTAAGGAGGAGAGGAATCTCTGTTGATGAGTTTGTTATGAATTTTGAGGAACCGAAT
AAGCCGGTTTTGTTAGAAGGGTGCTTGGAAAGTTGGCCTGCATTGGAGAAATGGAATAGG
GATTATTTGGCTGAGGAGTGTGGAGATGTGAAATTTTCAGTTGGGCCGGTGGAAATGAAA
CTTGAGGACTATTTTAGCTACTCTGATCAAGCGAGGGAAGAAAAGCCGTTGTATTTGTTT
GATCCAAAGTTTGCAGAGAAAGTTCCTCAGTTAGGAAAGGATTATGATGTCCCTATGTAC
TTCAATGAGGATTTGTTTAGTGTATTGGGTAATGAGAGGCCAGATTATAGATGGATTATT
ATTGGACCTGCGGGTTCCGGCTCGTCATTCCACATTGATCCGAATTCTACCTCTGCTTGG
AATGCGGTAATCAAAGGATCCAAGAAATGGGTGTTGTTTCCCCCTGATGTAGTGCCACCC
GGGGTTCATCCGAGCCCTGACGGTGCAGAAGTAGCAAGTCCCGTTTCAATAATAGAATGG
TTCATGAACTTTTATAATGCAACCAAGAATTGGAAAAAGAGACCTATTGAGTGTGTCTGC
AAGGCCGGGGAAGTAATCTTTGTACCTAATGGATGGTGGCATTTGGTCATCAATTTAGAG
GATTCGATTGCCATTACCCAGAACTTTGTTAGCAGGAGGAATTTACTGAATGTTTTGGAA
TTTCTAAAAAAGCCAAATGCTTGCACTCTTGTGTCGGGAACAAGTGACAGAGTCAATTTG
CACGACAAATTTAAGAATGCCATTGAAGCATATCTTCCTGGAACTATTGATGAGTTGACT
CTGAAAGACGAGGAGAAAAAAGCCCAGCAGAAGAAACCTTCCTTCTGGGAATCTGTCACT
GATTCAAAAGCAGGCGCTTTCAAATTTTCTTTTTGA

Peptide Sequence

PEP ID

XP_016513620.1
PEP Infomation

PREDICTED: F-box protein At5g06550-like [Nicotiana tabacum]
Sequence

MLGSKTLIFKKQKRKRKNGKSKKSKKIYVSKKEEKITKSHQITPKQEVEEEDDEGFSLKA
SAQSDSYGVQPLGNLYFNPSYHNSRNTGLGNLQTLTDELVLDILGLLEGTHLGILSNVSK
GFYIFCNHEPLWRNLVLETCKGGFFFKGSWKSTFVSAYKQPSFPVLSSGLKVRDFYSDYL
FQSWLCANLEMKPEWLEKDNIVRRRGISVDEFVMNFEEPNKPVLLEGCLESWPALEKWNR
DYLAEECGDVKFSVGPVEMKLEDYFSYSDQAREEKPLYLFDPKFAEKVPQLGKDYDVPMY
FNEDLFSVLGNERPDYRWIIIGPAGSGSSFHIDPNSTSAWNAVIKGSKKWVLFPPDVVPP
GVHPSPDGAEVASPVSIIEWFMNFYNATKNWKKRPIECVCKAGEVIFVPNGWWHLVINLE
DSIAITQNFVSRRNLLNVLEFLKKPNACTLVSGTSDRVNLHDKFKNAIEAYLPGTIDELT
LKDEEKKAQQKKPSFWESVTDSKAGAFKFSF

Transcript Sequence

Gene sequence data has not been registered.